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Cold Spring Harbor Laboratory Research Papers Published in 2023*

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*List under construction: More to be added soon!

CSHL-affiliated author names are in bold.

Deep photoautotrophic prokaryotes contribute substantially to carbon dynamics in oxygen-deficient waters in a permanently redox-stratified freshwater lake.
Cohen, A. B., Klepac-Ceraj, V., Bidas, K., Weber, F., Garber, A. I., Christensen, L. N., Cram, J. A., McCormick, M. L. & Taylor, G. T.
(2023, January). Limnology and Oceanography68(1), 232-247. https://doi.org/10.1002/lno.12262

Toward a data infrastructure for the Plant Cell Atlas
Fahlgren, N., Kapoor, M., Yordanova, G., Papatheodorou, I., Waese, J., Cole, B., Harrison, P., Ware, D., Tickle, T., Paten, B., Burdett, T., Elsik, C. G., Tuggle, C. K., Provart, N. J.
(2023, January 2). Plant Physiology, 191(, 35-46. https://doi.org/10.1093/plphys/kiac468

The transcription factor TCFL5 responds to A-MYB to elaborate the male meiotic program in mice.
Cecchini, K., Biasini, A., Yu, T., Säflund, M., Mou, H., Arif, A., Eghbali, A., Colpan, C., Gainetdinov, I., de Rooij, D. G., Weng, Z., Zamore, P. D., & Özata, D. M.
(2023, January 4). Reproduction, 165(2), 183-196. https://doi.org/10.1530/REP-22-0355

MCRS1 modulates the heterogeneity of microtubule minus-end morphologies in mitotic spindles.
Laguillo-Diego, A., Kiewisz, R., Martí-Gómez, C., Baum, D., Müller-Reichert, T., & Vernos, I.
(2023, January 1). Molecular Biology of the Cell, 34(1), ar1. https://doi.org/10.1091/mbc.E22-08-0306-T

End-to-end learning of multiple sequence alignments with differentiable Smith–Waterman.
Petti, S., Bhattacharya, N., Rao, R., Dauparas, J., Thomas, N., Zhou, J., Rush, A. M., Koo, P.,  & Ovchinnikov, S.
(2023, January). Bioinformatics, 39(1), btac724. https://doi.org/10.1093/bioinformatics/btac724

Genetic ancestry inference from cancer-derived molecular data across genomic and transcriptomic platforms.
Belleau, P., Deschênes, A., Chambwe, N., Tuveson, D. A., & Krasnitz, A.
(2023, January 4). Cancer Research, 83(1), 49-58. https://doi.org/10.1158/0008-5472.CAN-22-0682

BRD8 maintains glioblastoma by epigenetic reprogramming of the p53 network.
Sun, X., Klingbeil, O., Lu, B., Wu, C., Ballon, C., Ouyang, M., Wu, X. S., Jin, Y., Hwangbo, Y., Huang, Y.-H., Somerville, T. D. D., Chang, K., Park, J., Chung, T., Lyons, S. K., Shi, J., Vogel, H., Schulder, M., Vakoc, C. R., & Mills, A. A.
(2023, January). Nature, 613(7942), 195-202. https://doi.org/10.1038/s41586-022-05551-x

Single-cell analysis opens a goldmine for plant functional studies.
Xu, X., & Jackson, D.
(2023, February). Current Opinion in Biotechnology, 79, 102858. https://doi.org/10.1016/j.copbio.2022.102858

Senescence Rewires Microenvironment Sensing to Facilitate Antitumor Immunity.
Chen, H.-A., Ho, Y.-J., Mezzadra, R., Adrover, J. M., Smolkin, R., Zhu, C., Woess, K., Bernstein, N., Schmitt, G., Fong, L., Luan, W., Wuest, A., Tian, S., Li, X., Broderick, C., Hendrickson, R. C., Egeblad, M., Chen, Z., Alonso-Curbelo, D., & Lowe, S. W.
(2023, February 6). Cancer Discovery, 13(2), 432–453. https://doi.org/10.1158/2159-8290.CD-22-0528